Archive

  • Visit JGI.DOE.GOV
News & Publications
Home › Publications › High-quality permanent draft genome sequence of the Lebeckia – nodulating Burkholderia dilworthii strain WSM3556(T)

High-quality permanent draft genome sequence of the Lebeckia – nodulating Burkholderia dilworthii strain WSM3556(T)

Published in:

Stand Genomic Sci 10 , 64 (Sep 19 2015)

Author(s):

De Meyer, S. E., Tian, R., Seshadri, R., Ivanova, N., Pati, A., Markowitz, V., Woyke, T., Yates, R., Howieson, J., Kyrpides, N., Reeve, W.

DOI:

10.1186/s40793-015-0048-3

Abstract:

Burkholderia dilworthii strain WSM3556(T) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective N2-fixing root nodule of Lebeckia ambigua collected near Grotto Bay Nature Reserve, in the Western Cape of South Africa, in October 2004. This plant persists in infertile and deep sandy soils with acidic pH, and is therefore an ideal candidate for a perennial based agriculture system in Western Australia. WSM3556(T) thus represents a potential inoculant quality strain for L. ambigua for which we describe the general features, together with genome sequence and annotation. The 7,679,067 bp high-quality permanent draft genome is arranged in 140 scaffolds of 141 contigs, contains 7,059 protein-coding genes and 64 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

View Publication

Share this:

  • Click to share on Facebook (Opens in new window)
  • Click to share on LinkedIn (Opens in new window)
  • Click to share on Pinterest (Opens in new window)
  • Click to share on Twitter (Opens in new window)
  • Click to print (Opens in new window)
  • JGI.DOE.GOV
  • Disclaimer
  • Accessibility / Section 508
Lawrence Berkeley National Lab Biosciences Area
A project of the US Department of Energy, Office of Science

JGI is a DOE Office of Science User Facility managed by Lawrence Berkeley National Laboratory

© 1997-2025 The Regents of the University of California