Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4

Published in:

Stand Genomic Sci 8(3) , 441-9 (Jul 30 2013)

Author(s):

Neupane, S., Goodwin, L. A., Hogberg, N., Kyrpides, N. C., Alstrom, S., Bruce, D., Quintana, B., Munk, C., Daligault, H., Teshima, H., Davenport, K., Reitenga, K., Green, L., Chain, P., Erkkila, T., Gu, W., Zhang, X., Xu, Y., Kunde, Y., Chertkov, O., Han, J., Han, C., Detter, J. C., Ivanova, N., Pati, A., Chen, A., Szeto, E., Mavromatis, K., Huntemann, M., Nolan, M., Pitluck, S., Deshpande, S., Markowitz, V., Pagani, I., Klenk, H. P., Woyke, T., Finlay, R. D.

DOI:

10.4056/sigs.4027757

Abstract:

Serratia proteamaculans S4 (previously Serratia sp. S4), isolated from the rhizosphere of wild Equisetum sp., has the ability to stimulate plant growth and to suppress the growth of several soil-borne fungal pathogens of economically important crops. Here we present the non-contiguous, finished genome sequence of S. proteamaculans S4, which consists of a 5,324,944 bp circular chromosome and a 129,797 bp circular plasmid. The chromosome contains 5,008 predicted genes while the plasmid comprises 134 predicted genes. In total, 4,993 genes are assigned as protein-coding genes. The genome consists of 22 rRNA genes, 82 tRNA genes and 58 pseudogenes. This genome is a part of the project “Genomics of four rapeseed plant growth-promoting bacteria with antagonistic effect on plant pathogens” awarded through the 2010 DOE-JGI’s Community Sequencing Program.

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