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Complete genome sequence of the acetate-degrading sulfate reducer Desulfobacca acetoxidans type strain (ASRB2(T))

Published in:

Standards in Genomic Sciences 4(3) , 393-401 ( 2011)

Author(s):

Goker, M., Teshima, H., Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Huntemann, M., Liolios, K., Ivanova, N., Pagani, I., Mavromatis, K., Ovchinikova, G., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Brambilla, E. M., Rohde, M., Spring, S., Detter, J. C., Woyke, T., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H. P.

DOI:

Doi 10.4056/Sigs.2064705

Abstract:

Desulfobacca acetoxidans Elferink et al. 1999 is the type species of the genus Desulfobacca, which belongs to the family Syntrophaceae in the class Deltaproteobacteria. The species was first observed in a study on the competition of sulfate-reducers and acetoclastic methanogens for acetate in sludge. D. acetoxidans is considered to be the most abundant acetate-degrading sulfate reducer in sludge. It is of interest due to its isolated phylogenetic location in the 16S rRNA-based tree of life. This is the second completed genome sequence of a member of the family Syntrophaceae to be published and only the third genome sequence from a member of the order Syntrophobacterales. The 3,282,536 bp long genome with its 2,969 protein-coding and 54 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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