(2024) Development of a Recombineering System for the Acetogen Eubacterium limosum with Cas9 Counterselection for Markerless Genome Engineering.
ACS Synthetic Biology 13(8), 2505-2514.
10.1021/acssynbio.4c00253
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Publications
(2024) Methyl-reducing methanogenesis by a thermophilic culture of Korarchaeia.
Nature 632(8027), 1131-1136.
10.1038/s41586-024-07829-8
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(2024) Dynamics and activity of an ammonia-oxidizing archaea bloom in South San Francisco Bay.
The ISME Journal: Multidisciplinary Journal of Microbial Ecology 18(1), wrae148.
10.1093/ismejo/wrae148
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(2024) Network Topology Evaluation and Transitive Alignments for Molecular Networking.
Journal of The American Society for Mass Spectrometry 35(9), 2165-2175.
10.1021/jasms.4c00208
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(2024) Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses.
mSystems 9(9), e00242-24.
10.1128/msystems.00242-24
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(2024) Optimized CRISPR Interference System for Investigating Pseudomonas alloputida Genes Involved in Rhizosphere Microbiome Assembly.
ACS Synthetic Biology 13(9), 2912-2925.
10.1021/acssynbio.4c00312
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(2024) Providing biological context for GWAS results using eQTL regulatory and co‐expression networks in Populus.
New Phytologist 244(2), 603-617.
10.1111/nph.20026
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(2024) Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution.
Nature Communications 15(1), 7506.
10.1038/s41467-024-51841-5
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(2024) Seven genome sequences of airborne, bacterial isolates from Antarctica.
Microbiology Resource Announcements 13(6), e01129-23.
10.1128/mra.01129-23
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(2024) An efficient cre‐based workflow for genomic integration and expression of large biosynthetic pathways in Eubacterium limosum.
Biotechnology and Bioengineering 121(10), 3360-3366.
10.1002/bit.28796
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