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Huerta, A. M. et al. (2006) Selection for unequal densities of sigma(70) promoter-like signals in different regions of large bacterial genomes. Plos Genetics 2(11), 1740-1750. ARTN e185 DOI 10.1371/journal.pgen.0020185
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Huerta, A. M. et al. (2006) Positional conservation of clusters of overlapping promoter-like sequences in enterobacterial genomes. Molecular Biology and Evolution 23(5), 997-1010. Doi 10.1093/Molbev/Msk004
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Hixson, K. K. et al. (2006) Biomarker candidate identification in Yersinia pestis using organism-wide semiquantitative proteomics. J Proteome Res 5(11), 3008-17. 10.1021/pr060179y
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Hallam, S. J. et al. (2006) Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota. Plos Biology 4(4), 520-536. Artn E95 Doi 10.1371/Journal.Pbio.0040095
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Hallam, S. J. et al. (2006) Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum. Proceedings of the National Academy of Sciences of the United States of America 103(48), 18296-18301. Doi 10.1073/Pnas.0608549103
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Gowda, M. et al. (2006) Robust analysis of 5 '-transcript ends (5 '-RATE): a novel technique for transcriptome analysis and genome annotation. Nucleic Acids Research 34(19). Doi 10.1093/Nar/Gkl522
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Doggett, N. A. et al. (2006) A 360-kb interchromosomal duplication of the human HYDIN locus. Genomics 88(6), 762-771. Doi 10.1016/J.Ygeno.2006.07.012
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DeSantis, T. Z. et al. (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Applied and Environmental Microbiology 72(7), 5069-5072. Doi 10.1128/Aem.03006-05
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DeSantis, T. Z. et al. (2006) NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes. Nucleic Acids Research 34, W394-W399. Doi 10.1093/Nar/Gkl244
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Collins, A. G. et al. (2006) Medusozoan phylogeny and character evolution clarified by new large and small subunit rDNA data and an assessment of the utility of phylogenetic mixture models. Systematic Biology 55(1), 97-115. Doi 10.1080/10635150500433615
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