Archive

  • Visit JGI.DOE.GOV
Our Projects
Home › Our Projects › Approved User Proposals › Approved Proposals FY08

Approved Proposals FY08

Following are the approved user proposals for fiscal year 2008.

Community Science Program (CSP) Plans

Large Eukaryotes

Organism Proposer Affiliation
Eucalyptus tree Myburg Univ. of Pretoria
Foxtail millet (Setaria italica) Bennetzen Univ. of Georgia
Porphyra purpurea (a marine red alga) Brawley Univ. of Maine

Small Eukaryotes

Organism Proposer Affiliation
Agaricus bisporus (a leaf-litter degrading homobasidiomycete ) Challen Univ. of Warwick
Heterodera glycines (Soybean Cyst Nematode) Lambert Univ. of illinois at Urbana-Champaign
Marchantia polymorpha Bowman Monash Univ. and Univ. of California Davis
Paxillus involutus (an ectomycorrhizal fungus) Tunlid Lund Univ.
Phaeocystis antarctica: A dominant phytoplankter and ice alga in the Southern Ocean Berg Stanford Univ.
Phaeocystis globosa Allen The Inst. for Genomic Research
ESTs for Pines and Other Conifers Dean Univ. of Georgia
Tetrahymena thermophila strain SB210 Collins Univ. of California Berkeley

Metagenomes

Organism Proposer Affiliation
Type I Accumulibacter McMahon Univ. of Wisconsin-Madison
Anammox bacteria (Scalindua marina, Brocadia fulgida, and Anammoxglobus propionicus) Jetten Radboud Univ.
A biogas-producing microbial community Wu Univ. of California Davis
Extreme microbial habitats across the Yellowstone geothermal ecosystem Inskeep Montana State Univ.

Isolates

Organism Proposer Affiliation
Allochromatium vinosum DSM 180(T) Dahl Univ. of Bonn
Uncultivated methane-oxidizing archaeon ANME-1 Hallam Univ. of British Columbia
Budding and non-budding stalked bacteria from aquatic environments (Asticcacaulis biprosthecum, Asticcacaulis excentricus, Brevundimonas subvibrioides, Herschia baltica, Hyphomicrobium denitrificans, and Rhodomicrobium vannielii) Brun Indiana Univ.
Diaphorobacter sp. strain TPSY, Ferrutens nitratireducens strain 2002, and Azospira suillum strain PS Coates Univ. of California Berkeley
Frankia strains (EuI1c, BCU110501, R43, BMG5.12, and AmMr)
Tisa Univ. of New Hampshire
Haloalkaliphilic sulfate-, thiosulfate- and sulfur-reducing bacteria (Desulfonatronovirga dismutans ASO3-1, Desulfovibrio alkaliphilus AHT2, and Dethiobacter alkaliphilus AHT1)
Muyzer Delft Univ. of Technology
Halothiobacillus neapolitanus and Thiomonas intermedia Heinhorst Univ. of Southern Mississippi
Thermophilic or hyperthermophilic methanoarchaea within the Methanococcales (Methanothermococcus okinawensis IH1, Methanotorris igneus Kol 5, Methanotorris formicicus Mc-S-70, Methanocaldococcus fervens AG86, Methanocaldococcus infernus ME, Methanocaldococcus vulcanius M7, and Methanocaldococcus strain FS406-22)
Whitman Univ. of Georgia
Type I and Type II methanotrophic bacteria (Methylomicrobium album BG8 and Methylosinus trichosporium OB3b)
Stein Univ. of California Riverside
Two Micromonosporas (aurantiaca and L5)
Hirsch Univ. of California Los Angeles
Natrialba magadii ATCC 43099
Maupin-Furlow Univ. of Florida
Pseudonocardia dioxanivorans CB1190
Mahendra Univ. of California Berkeley
Selenospirillum indicus Bini Rutgers Univ.
Starkeya novella Kappler Univ. of Queensland
Thermovibrio ammonificans DSM 15698
Vetriani Rutgers Univ.
Variovorax paradoxus strains (S110 and EPS)
Han Rensselaer Polytechnic Inst.
Zymomonas mobilis strains: Zymomonas mobilis strains: subsp. mobilis ATCC 10988, ATCC 29191, ATCC 31821 (ZM4), CP4; subsp. pomaceae ATCC 29192; sp. NCIB 11163
Pappas Univ. of Athens
  • Approved Proposals FY21
  • Approved Proposals FY20
  • Approved Proposals FY19
  • Approved Proposals FY18
  • Approved Proposals FY17
  • Approved Proposals FY16
  • Approved Proposals FY14
  • Approved Proposals FY15
  • Approved Proposals FY13
  • Approved Proposals FY12
  • Approved Proposals FY11
  • Approved Proposals FY10
  • Approved Proposals FY09
  • Approved Proposals FY08
  • Approved Proposals FY07
  • Approved Proposals FY06
  • Approved Proposals FY05
  • ETOP Projects

More from the JGI archives:

  • Software Tools
  • Science Highlights
  • News Releases
  • Blog
  • User Proposals
  • 2018-24 Strategic Plan
  • Progress Reports
  • Historical Primers
  • Legacy Projects
  • Past Events
  • JGI.DOE.GOV
  • Disclaimer
  • Accessibility / Section 508
Lawrence Berkeley National Lab Biosciences Area
A project of the US Department of Energy, Office of Science

JGI is a DOE Office of Science User Facility managed by Lawrence Berkeley National Laboratory

© 1997-2025 The Regents of the University of California