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May 20, 2021

Olpidium, The Key to the Origin of Terrestrial Fungi

From Sekimoto et al., 2011: Olpidium bornovanus, a unicellular fungus, is an obligate parasite of plants that reproduces with flagellated, swimming zoospores. A-B. Vegetative unicellular thalli in cucumber root cells. Thalli differentiate into sporangia with zoospores, or into resting spores. C. An empty sporangium, after zoospore release. D. A thick-walled resting spore. E. Zoospores being released from a sporangium, showing the sporangium exit tube (arrowheads). F. A swimming zoospore with a single posterior flagellum. G. An encysted zoospore. Bars: A-E = 10 μm; F,G = 5 μm. (Figures are from Sekimoto et. al., 2011 used under a Creative Commons Attribution 2.0 License.)In this guest blog: a behind-the-paper look at the fungus Olpidium, a link in the evolution and transition of fungi from aquatic to terrestrial habitats. [Read More]

May 11, 2021

Behind the Paper: Hot Springs Metagenomics

Nick Reichart, Montana State University graduate student and 2020 SCGSR fellowMontana State University graduate student Nick Reichart spent a year at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program. [Read More]

April 9, 2021

Statement on the Use of Genomics Data

Read our Statement on the Use of Genomics Data. [Read More]

April 9, 2021

Statement on the Use of Genomics Data

Aerial photo of the IGBBuilding upon the principles for open access in the field of genomics, the JGI recognizes the need to engage the community to inform necessary changes to JGI data policies. [Read More]

April 8, 2021

Webinar: SIP technologies at EMSL and JGI

image for webinar on stable isotope technologies at the JGI and EMSLAt the JGI and EMSL, various tools leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating labeled compounds. [Read More]

March 22, 2021

Webinar: MycoCosm Tutorial

MycoCosm webinar screencapHow researchers can utilize the JGI data portal MycoCosm for conducting fungal genomics analyses. [Read More]

March 22, 2021

Webinar: PhycoCosm Tutorial

PhycoCosm webinar screencapAn introduction to the JGI data portal PhycoCosm, and how researchers can harness it for exploring algal genomes and genes. [Read More]

March 22, 2021

Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection

screencap long reads webinar_ Metagenome ProgramHow the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects. These long-reads have also been applied to DNA methylation analysis as well as improving metagenome assemblies. [Read More]

March 15, 2021

Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools

NEON webinar screencapThrough the collaborative science call (FICUS) between the JGI and EMSL, successful applicants can also access resources at the National Ecological Observatory Network (NEON). [Read More]

March 9, 2021

Webinar: Introducing the BioSANS capability

Screencap from the Introducing BioSANS capability webinar hosted by EMSL March 2021A webinar on how researchers could tap the capabilities of the Biological Small-Angle Neutron Scattering (BioSANS) when applying to the EMSL-JGI FICUS call for proposals. [Read More]
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