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GreenCut algorithm in Crop Biotech Update

Grossman and colleagues revealed that many of the GreenCut proteins are also present in ancient cyanobacteria, red algae, and diatoms. Further assessment of these proteins is expected to bring more discoveries about their functions in photosynthetic cells, and how the photosynthetic cells might be adapted to survive various environmental conditions. Read more in ISAAA’s Crop… [Read More]

GreenCut algorithm in e! Science News

Using advanced computational tools to analyze the genomes of 28 different plants and photosynthetic organisms, Grossman and his colleagues at the University of California in Los Angeles and the Joint Genome Institute of the Department of Energy were able to identify 597 proteins encoded on plant and green algal genomes, but that are not present… [Read More]

Cassava project in Bloomberg View

Over the past few years, the U.S. Department of Energy’s Joint Genome Institute has taken up the challenge to sequence additional starches that could make a significant difference in developing nations where corn and soybean are less important than such staples as foxtail millet, sorghum and cassava. Such crops, if engineered to be more nutritious,… [Read More]

Mycosphaerella project in Media Newswire

Enzymes often break down plant cell walls and begin removing nutrients, leading to the plant’s death. M. graminicola, however, enters the plant through stomata, small pores in the surface of leaves that allow for exchange of gases and water.  Goodwin said the fungus seems to lay dormant between plant cells, avoiding detection. It later infects… [Read More]

Mycosphaerella genome project in Agricultural Research

The pathogen that causes the disease, Mycosphaerella graminicola, has a long “silent period,” a latent stage during which it takes nutrition from the living plant and evades the host plant’s natural defenses. Scientists previously did not have a good understanding of how the organism infects wheat, or how the wheat plant itself resists the pathogen…. [Read More]

Mycosphaerella genome project in Farmers Guardian

SCIENTISTS have cracked the genetic code of septoria tritici – the most important foliar disease of wheat in the UK – and in doing so have gained an insight into how the disease is able to evade wheat’s natural defences. The researchers, who were funded by the BBSRC and others, hope the study, which reveals… [Read More]

Poplar rust genome project on Wisconsin Ag Connection

The sequencing of the genetic codes of wheat stem rust pathogen (Puccinia graminis) and poplar leaf rust pathogen (Melampsora larici-populina) is expected to help researchers develop control strategies to address worldwide threats to wheat fields and tree plantations. The study, published in the Proceedings of the National Academy of Sciences, was a six-year collaborative effort… [Read More]

A.niger genome project on The Bioenergy Site

Published online ahead of print May 4, 2011 in Genome Research, a team led by Scott Baker of the Pacific Northwest National Laboratory compared the genome sequences of two Aspergillus niger strains to, among other things, better harness its industrial potential in biofuels applications. As more than a million tons of citric acid are produced annually, the production… [Read More]

JGI Science @ the Lesher: “The Deal with Microbes” video

The May 9, 2011 event at the Lesher Center for the Arts in downtown Walnut Creek featured Jonathan Eisen and Rachel Mackelprang of DOE JGI, and Terry Hazen of Berkeley Lab. KTVU Health and Science Editor John Fowler served as panel moderator. (Note: There’s a short delay before the video starts at the 20-second mark.)… [Read More]

DOE JGI Director honored by Middlebury College

Waddell, who was presented the honorary degree, doctor of humane letters, was one of six people to receive honorary degrees at this year’s commencement ceremonies. The others were economics scholar and international adviser to political leaders Padma Desai, doctor of laws; Vermont’s long-serving senator, Patrick Leahy, doctor of laws; local volunteer and activist Dorothy Bigelow Neuberger… [Read More]