Archive

News & Publications
Home › Blog

Selaginella genome project in GenomeWeb Daily News

By sequencing the genome of the spikemoss Selaginella moellendorffii and comparing it to several other sequenced plant genomes, researchers have identified genetic patterns that correspond to different stages of plant evolution. Read more at GenomeWeb Daily News [Read More]

Poplar leaf rust genome project in GenomeWeb Daily News

By comparing the genomes to one another and to some previously sequenced fungal pathogens and symbionts, the researchers identified features in the rust fungi genomes that seem to coincide with their pathogenic lifestyles. For instance, they tracked down a slew of genes coding for so-called effectors — small, secreted proteins that help the fungi thwart… [Read More]

Poplar leaf rust genome project on SeedQuest

Sequenced at the DOE JGI using the Sanger platform under the 2006 Community Sequencing Program, the 101-million base pair genome of Melampsora larici-populina, the first tree pathogen sequenced, was made publicly available in 2008. Poplar leaf rust outbreaks weaken poplar trees, a candidate bioenergy feedstock whose genome sequence was published by the DOE JGI in… [Read More]

Single cell sequencing in Genome Technology

Using a single-cell approach developed by Ramunas Stepanauskas at the Bigelow Laboratory for Ocean Sciences in West Boothbay Harbor, Maine, a group of researchers aims to sequence 60 new marine bacterio-plankton in conjunction with the US Department of Energy’s Joint Genome Institute. That way, there will be better reference genomes available for researchers studying marine… [Read More]

JGI Science @ the Lesher on Walnut Creek Patch

Most of us don’t even think about the insides of cows, the genes of waterfleas or the behavioral genetics of pollinating bees, but the 250 expert researchers who sequence microbial species—and actually understand the results—also know how to translate heavy duty science into layman’s language. Read more on the Walnut Creek Patch [Read More]

Methylmercury-producing bacterium in Shorelines

A newly decoded bacterial genome brings scientists one step closer to unlocking the secret behind the production of methylmercury, the chemical notorious for contaminating tuna and other seafood. Most mercury pollution comes from the burning of fossil fuels. Once in the atmosphere, it seeps into the rain and gradually trickles down to the sea. Certain… [Read More]

Methylmercury-producing bacterium in Smithsonian Science

The new genome, sequenced at the California-based DOE Joint Genome Institute, and completed at Oak Ridge National Laboratory, was published in the Journal of Bacteriology. It lays the foundation for future research to examine the little understood mechanisms behind the production of methylmercury. “We know a little about the bacteria that produce methylmercury but we… [Read More]

Arabidopsis lyrata genome project in GenomeWeb

The international research team, led by investigators at the Max Planck Institute for Developmental Biology, compared the newly sequenced genome to the much smaller genome of the model organism A. thaliana. Their findings suggest that the pared down version of the genome found in A. thaliana reflects a spate of small deletions — many affecting… [Read More]

Brown mercury-producing bacterium in Medical News Today

“What is not known are the genes or the proteins that allow these bacteria to mediate the transformation,” said ORNL’s Steven Brown, who led a research team to sequence the genome of a bacterium in the Desulfovibrio genus that is capable of methylating mercury. The new genome, sequenced at the California-based DOE Joint Genome Institute… [Read More]