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December 1, 2020

Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics

Tanja Woyke JGITanja Woyke has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020 in recognition of her contributions made to the field. [Read More]

November 19, 2020

Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities

JGI engagement webinar:harnessing metabolomics capabilitiesThe JGI Engagement Webinar held November 5, 2020 (video available with captions) spotlighted the metabolomic analysis capability available through the Community Science Program (CSP). [Read More]

November 5, 2020

UC Merced Interns Reflect on Their JGI Summer Projects

Axel Visel screencap from the video introducing the 2020 JGI-UC Merced internsOver the summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the larger mission of the U.S. Department of Energy. Students also worked with their mentors to practice and develop presentation skills as well as build their network in the field of genomics and scientific research. [Read More]

October 28, 2020

JGI Welcomes New UEC Members

(left to right) Kathleen Greenham of the University of Minnesota, Matthias Hess of the University of California, Davis and Kristen DeAngelis of University of Massachusetts-Amherst,The JGI User Executive Committee, which represents the JGI user community, welcomes three new members: Kathleen Greenham, Matthias Hess, and Kristen DeAngelis. [Read More]

October 21, 2020

The JGI Data Portal: Improving User Experience

JGI Data Portal screencapThe JGI Data Portal is a pilot download experience currently accessible from JGI’s plant portal Phytozome, and an updated alternative to the Genome Portal. [Read More]

October 21, 2020

Help from Citrus’ Bitter, Hardier Cousin

Trifoliate orange fruiting at the Brooklyn Botanic Gardens. (Steven Severinghaus, CC BY-NC-SA 2.0)The trifoliate orange can resist citrus greening; its genome sequence to help researchers identify genes that can help other citrus resist the disease. [Read More]

October 7, 2020

From Life at the Extremes to Editing Genomes

Jennifer DoudnaJennifer Doudna and Emmanuelle Charpentier were recognized for their work on CRISPR-Cas9, technology described by the Nobel Foundation as having “a revolutionary impact on the life sciences.” For the past few years, Doudna’s lab has partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides, mining the IMG/M system for novel Cas genes and CRISPR systems. [Read More]

September 8, 2020

Engagement Webinar: How to Successfully Apply for a CSP Proposal

Sept 1 engagement webinar screencapDuring the JGI Engagement: Pro Tips for Webinar, researchers were invited to submit white papers to the Community Science Program (CSP)’s New Investigator call for proposals. The proposal call is open year-round, but proposals submitted by September 21, 2020, will be included in the next review. [Read More]

August 3, 2020

Toasting to the 2020 JGI-UC Merced Summer Internship Program

Toasting to JGI-UCMOn July 30, UC Merced students and their JGI mentors marked the end of their annual nine-week virtual internships. The celebration was preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, founders of the JGI-UC Merced genomics internship program, this was the largest turnout for the final presentations to date.  [Read More]

July 28, 2020

Accelerating Metagenomics Discoveries with Deep Learning

An example protein structure: the orange carotenoid protein. Proteins would be easier to align if they could be vectorized, acccording to Sevim. (Kerfeld lab group)JGI scientist Volkan Sevim is applying deep learning to genome science in order to make protein alignments more efficient. [Read More]
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