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Cassava genome research on redOrbit

The availability of the genome sequence enables the newly-funded project to study how cassava varieties differ from each other. “The contributions of 454 Life Sciences and DOE JGI in making the cassava genome a reality have opened a new chapter in cassava research worldwide. We’re excited about the opportunity for cassava breeders to access new… [Read More]

Cassava genome research on Y!Finance

The impetus for the genome sequence began in 2003 with the formation of The Global Cassava Partnership (GCP-21), co-chaired by Dr. Claude Fauquet, director of the International Laboratory for Tropical Agriculture Biology (ILTAB) at the Donald Danforth Plant Science Center (DDPSC) in St. Louis, and Dr. Joe Tohme of the International Center for Tropical Agriculture… [Read More]

Cassava genome collaboration on EurekAlert!

Cassava is a root crop that serves as the primary food source for more than 750 million people each day. Although it has many properties that make it an important food across much of Africa and Asia, it also has many limitations. Cassava has poor nutritional content and is susceptible to many pathogens, particularly in… [Read More]

Sandia/JGI grasslands collaboration on R&D Mag

The project’s sequencing effort will focus on microorganisms associated with the roots of a common grass species, blue grama, and will interface with ongoing environmental change experiments at the UNM’s Sevilleta Long Term Ecological Research site in central New Mexico. “This award will enable us to better understand the metabolic potential of microbial communities native… [Read More]

Sandia/JGI grasslands project on Newswise

Sandia researchers and others at the University of New Mexico (UNM), the Joint BioEnergy Institute (JBEI), Novozymes and North Carolina State University’s Center for Integrated Fungal Research (NCSU-CIFR) have received a DNA sequencing award from the Department of Energy Joint Genome Institute (JGI) to study microbial genes in arid grasslands. The research combines interests in… [Read More]

New IMG tutorial suites

OpenHelix today announced the availability of new tutorial suites on Integrated Microbial Genomes (IMG), Integrated Microbial Genomes with Microbiome Samples (IMG/M), NCBI Viral Genomes and Viral Bioinformatics Resource Center (VBRC). IMG is a data management platform for analyzing microbial genomes sequenced by the Joint Genome Institute (JGI) of the U.S. Department of Energy and including… [Read More]

Dead zone metagenomic study in Newstrack India

Dead zones are areas of low dissolved-oxygen concentrations caused by climate change that play a major role in the ocean ecosystem and global climate balance because they are a source of greenhouse gases and sinks for nitrogen, robbing many ocean life forms of this critical nutrient.   Scientists have observed that the zones – found… [Read More]

Metagenome study in The Montreal Gazette

There is life in the planet’s expanding dead zones, say researchers, who have uncovered a remarkable microbe thriving in toxic waters off the B.C. coast. The bacteria take up carbon dioxide like a plant, consume sulphide that is deadly to most other life forms, and exhale nitrous oxide which is a potent greenhouse gas. The… [Read More]

Dead zone microbe on io9

Researchers have mapped the genome of a microbe that thrives in oxygen-deprived areas of the ocean known as “dead zones.” These creatures are increasing, and their ability to live without oxygen might make them perfect space-dwellers. The article, published today in Science, looks at a microbe known as SUPO5, which lives in areas of the… [Read More]

Dead zone metagenome study on the CBC

Canadian and U.S. researchers have mapped the genome of a microbe that lives in ocean “dead zones,” areas of low-oxygen water that are expanding because of climate change. Researchers at the University of British Columbia and the U.S. Department of Energy say the microbe, called SUP05, is the most abundant organism in these oxygen-minimum zones… [Read More]