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July 2, 2018

A Personal Stamp on the IGB

The signed steel beam upon its return from the JGI. (Paul Mueller)Beam-Signing Ceremony Collects Signatures for Posterity. On Friday, June 22, JGI Director Nigel Mouncey and Systems Biology Knowledgebase (KBase) CEO/CSO Adam Arkin gathered JGI and KBase staff for a historic ceremony. “The last time we convened together was 18 months ago to break ground,” Mouncey reminded the audience, referring to the January 2017 groundbreaking ceremony… [Read More]

April 30, 2018

May 30 JGI Safety & Wellness Fair in the Shadelands

ARF at JGI SWELL FairThe Joint Genome Institute (JGI) is hosting its 12th Annual Safety and Wellness (SWELL) Fair on Wednesday, May 30, and welcomes attendees from both staff and neighbors in the Shadelands. Click here to download a map.  WHEN: Wednesday, May 30, 2018, from 12pm-2pm WHERE: Joint Genome Institute Courtyard (2800 Mitchell Drive, Walnut Creek) The free SWELL Fair (click… [Read More]

April 22, 2018

Rethinking Agriculture from an Ecosystem Perspective

Evan DeLucia, director of CABBI, at the JGI 13th Annual Genomics of Energy & Environment Meeting. Click on the image to watch his talk, or go to bit.ly/JGI2018DeLucia.As the global population grows toward 10 billion people, we need to find ways to better manage the farmland that we have, while also removing CO2 from the atmosphere, said Evan DeLucia at JGI’s 13th Annual Genomics of Energy & Environment Meeting in San Francisco, Calif. As director of the Center for Advanced Bioenergy and Bioproducts… [Read More]

April 22, 2018

Assessing Soil Microbial Responses to Land Use Change

Krista McGuire of the University of Oregon at the JGI 13th Annual Genomics of Energy & Environment Meeting. Click on the image to watch her talk, or go to bit.ly/JGI2018McGuire.In a wide ranging talk that took the audience from the island of Manhattan to Southeast Asia, Krista McGuire, an associate professor in the Department of Biology at the University of Oregon, presented work on microbial responses to two key types of land use change: urbanization and agriculture. Most of the world’s population now resides… [Read More]

February 7, 2018

Determining the Citrus Ancestral Home

Mandarin (Citrus reticulata) orchards near Ailaoshan, Yunnan Province, China. (Fred Gmitter)Citrus is a major worldwide crop. In 2017, the US Department of Agriculture’s Foreign Agricultural Service estimated production would exceed 50 million metric tons, with 10 percent of that contributed by the United States. To defend this crop against Huanglongbing (a.k.a., citrus greening), an infectious disease destroying whole orchards, researchers have begun employing genomics to… [Read More]

January 26, 2018

IMG/VR Database Triples in Size

Growth over time in the total and unique number of viral sequences in IMG/VR. (Image composite by David Paez-Espino).Got 12 Gb of free storage to download it all? To better understand how Earth’s vast and diverse microbial population helps regulate global nutrient cycles, it helps to understand how viruses infect microbes, and affect their functions and metabolic processes. Two years ago, even though the number of viruses is estimated to be at least… [Read More]

October 25, 2017

JGI’s Klatu Chills at the North American Freezer Challenge

The JGI Freezer Challenge Team (left to right): Tom Vess, Christine Naca and Don Miller in front of two freezers being monitored by the Klatu system. As part of JGI's efforts to become more sustainable, Stirling freezers like the one on the left are being phased in because they use less than half of the energy consumed by the older freezer on the right.Freezer Preventive Monitoring Program A Model of Berkeley Lab Energy Efficiency Efforts It’s a common scene in popular culture, and it likely plays out in your own home: someone looking for a snack holds the refrigerator door open so long that eventually someone else complains that its cold enough for penguins to migrate from the… [Read More]

September 22, 2017

Meet a JGI Postdoc: Estelle Schaefer

Estelle Schaefer is a postdoc in John Vogel's Plant Functional Genomics groupFrom September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? Plant and microbe interactions. I’m setting up… [Read More]

September 21, 2017

Meet a JGI Postdoc: Adam Session

From September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? I work in the Eukaryote Super Program… [Read More]

September 20, 2017

Meet a JGI Postdoc: Kateryna Zhalnina

From September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? I study how plants use their exudation… [Read More]
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