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September 21, 2023

JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt – geNomad

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes cycle nutrients and adapt to climate change. [Read More]

August 10, 2023

Natural Prodcast Episode 20 – Brian Bachmann

In Natural Prodcast, guest Brian Bachmann covers genome mining from cave environments, and using biosynthetic engineering and synthetic biology to modify and analog complex natural product molecules. Natural Prodcast co-hosts Dan Udwary and Jackie Winter chat with Brian Bachmann on genome mining from cave environments, and using biosynthetic engineering and synthetic biology to modify and analog complex natural product molecules [Read More]

June 29, 2023

Genome Insider S4 Episode 4: Methane Makers in Yosemite’s Lakes – Mike Beman and Elisabet Perez Coronel

Genome Insider logoMeet researchers who have hiked, rafted and met local wildlife (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, but varied. They’re a great way to see how climate change affects freshwater ecosystems, and how those ecosystems work. [Read More]

June 22, 2023

Genome Insider S4 Episode 3: A Shrubbier Version of Rubber – Andrew Nelson and Colleen McMahan

Right now, our natural rubber comes from just one tree species: Hevea brasiliensis. It’s great at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North America: guayule. [Read More]

June 15, 2023

Genome Insider S4 Episode 2: The Busy World of Deep Sea Eruptions – Anna-Louise Reysenbach and Emily St. John

The ocean depths are vast and dark. But there are hotspots on the ocean floor — underwater volcanoes and hydrothermal vents — where lively microbial communities thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment. [Read More]

June 8, 2023

Genome Insider S4 Episode 1: Crops as Tough as World Cup Turf – James Schnable and Guangchao Sun

In our warming world, we’ll need corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these conditions, so plant biologists James Schnable, Guangchao Sun and Vladimir Torrres have looked into traits that could transfer from grasses into other crops. One grass they studied just happened to be the same species that covered World Cup pitches in 2022. [Read More]

February 9, 2023

Natural Prodcast Episode 19 – Bill Fenical

Natural Prodcast guest William Fenical of the Scripps Institution of Oceanography on the beginnings of marine natural products, his experiences in drug discovery, and exploring marine bacteria for novel chemistry. [Read More]

January 25, 2023

Natural Prodcast Episode 18 – A CSP Primer

Natural Prodcast podcast logoA crossover podcast on the JGI’s Community Science Program: what a CSP is, how you apply for and get one, and what happens once you do. [Read More]

December 8, 2022

Genome Insider S3 Episode 5: Work With the JGI! Tips for a Winning CSP Proposal

Genome Insider logoThe JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to scientists at any career stage, anywhere in the world, for free. We accept new projects related to energy and the environment several times a year. A few proposal calls have deadlines coming up – in January, March, and later on in the spring. In this episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda Harmon-Smith, who helps shepherd CSP projects along. [Read More]

November 17, 2022

JGIota: Looking back at how our cow rumen study drives higher learning

A Genome Insider Logo ImageHear from CSU-San Marcos course instructor Matt Escobar and UC Davis Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how a JGI study on cow rumen went from the lab to the classroom. [Read More]
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