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October 9, 2009

Need for standard definitions covered by PhysOrg

As the proverbial “fire hose of data” becomes a Niagara torrent, with conservative estimates of 12,000 draft genomes hitting the public databases by 2012, researchers may be surprised to find that these datasets describe genomes that are not complete. Recognizing the problem, a group of researchers from several sequencing centers, including the DOE Joint Genome Institute (JGI), the Sanger Institute and the Human Microbiome Project (HMP) Jumpstart Consortium sequencing institutes, has proposed a new set of standards that expand upon the so-called “Bermuda standard.” In the October 9 issue of the journal Science, they propose four additional categories between “draft” and “finished” status that reflect varying levels of completeness.

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