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January 14, 2010

Soybean genome on redOrbit

Jeremy Schmutz, the study’s first author and a DOE JGI scientist at the HudsonAlpha Institute for Biotechnology in Alabama, said that the soybean sequencing was the largest plant project done to date at the DOE Joint Genome Institute. “It also happens to be the largest plant that’s ever been sequenced by the whole genome shotgun… [Read More]

January 14, 2010

Soybean sequence on Agence France Presse

Scientists on Wednesday unveiled the genome of the soybean, saying it was an achievement that should deepen understanding of one of the world’s most important crops, help to boost yields and defend the plant against pests. The study, published by the British weekly science journal Nature, provides a springboard for research into soy’s DNA structure… [Read More]

January 14, 2010

Soybean sequence on UC Newsroom

Soybean, one of the most important global sources of protein and oil, is now the first legume species with a published complete draft genome sequence. The sequence and its analysis appear in the Jan. 14 edition of the journal Nature. The research team comprised 18 institutions, including the U.S. Department of Energy Joint Genome Institute… [Read More]

October 9, 2009

Standard definitions for genome sequences on EurekAlert!

In 1996, researchers from major genome sequencing centers around the world convened on the island of Bermuda and defined a finished genome as a gapless sequence with a nucleotide error rate of one or less in 10,000 bases. This effectively set the quality target for the human genome effort and was quickly applied to other… [Read More]

October 2, 2009

T. reesei research a DOE National Impact story

In 2008, scientists funded in part by the U.S. Department of Energy (DOE) Office of Science at the DOE Joint Genome Institute (JGI) mapped the genome of this important organism using the Army reference strain. According to Eddy Rubin, DOE JGI Director in 2008 interview, “the genome of T. reesei provides us with a roadmap… [Read More]

September 28, 2009

“Bioprospecting Termites” at Spectre Footnotes

In 2005, the microbial ecologist Falk Warnecke, of the Department of Energy’s Joint Genome Institute, traveled with researchers from Caltech and the San Diego biotech company Diversa to Costa Rica, where they opened up a termite nest in a tree. The group dissected 165 worker termites, freezing the contents of their third guts in liquid… [Read More]

September 24, 2009

T. reesei research on ISA’s InTech

During World War II, Trichoderma reesei frustrated American Army quartermasters in the South Pacific by speeding up the rate at which canvas supplies wore out. Now the same fungus is a key producer of industrial enzymes that break down biomass for biofuel production. In 50 short years, the fungus has gone from being the bane… [Read More]

September 2, 2009

Profile: Richard Myers of HudsonAlpha

But in 2008, with much ado that included a glowing endorsement from Alabama Governor Bob Riley, Myers officially made the move to HudsonAlpha. In addition to being handed the steering wheel of a new institute, this was a homecoming of sorts for the Tuscaloosa native. Myers’ lab continues to work with the Joint Genome Institute… [Read More]

September 2, 2009

“Fungal Map of Mutations Key to Increasing Enzyme Production for Bioenergy Use”

In half a century, one fungus has gone from being the bane of the Army quartermasters’ existence in the Pacific to industry staple and someday, as part of the U.S. Department of Energy’s mission to promote national energy security through clean, renewable energy development, a biofuel producers’ best friend. Trichoderma reesei’s makeover is due in… [Read More]

August 21, 2009

Looking beyond biotech companies for microbe-based biofuels

If you’re feeling ill trying to keep up with all the strange biofuel news these days, you might want to have some lab tests run. You could have a form of E. coli poisoning, a cyanobacteria outbreak, or maybe you accidentally ingested some highly toxic fire moss or perhaps bumped into a desert locust –… [Read More]
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