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Brachypodium genome project on The Warsaw Voice

Brachypodium distachyon, commonly called purple false brome, is a model grass that enables researchers to more easily and thoroughly study temperate cereals, such as wheat, barley, rye and oats. These grasses are one of the most important groups of domesticated plants. The sequencing of the nuclear genome of Brachypodium is a big step towards intensified… [Read More]

Tammar wallaby foregut microbiome

Australia and New Zealand were separated from other land masses for millennia, and the unique marsupials found there such as kangaroos and wallabies have forestomachs adapted to efficiently break down lignocellulosic plant mass to extract nutrients. Australian marsupials such as the Tammar wallaby (above) contain unique, uncultured bacteria that could be useful in breaking down… [Read More]

Schizophyllum commune project on Power Online

The DOE Joint Genome Institute (JGI) previously sequenced and published the genomes of two wood-decaying fungi. Now a team of researchers led by scientists from the DOE JGI and the University of Utrecht announce the analysis of a third such genome in a study published online July 11 in Nature Biotechnology. All told, DOE JGI… [Read More]

Volvox carteri project on Astrobiology magazine

“If you think of proteins in terms of lego bricks, Chlamydomonas already had a great lego set,” says James Umen, assistant professor in the Plant Molecular and Cellular Biology Laboratory at the Salk Institute. “Volvox didn’t have to buy a new one, and instead could experiment with what it had inherited from its ancestor.”  Read… [Read More]

Volvox carteri project on NCTimes.com Blog

The study was published in the July 9 issue of Science. It may also be pertinent to the ongoing development of algae as a biofuel petroleum replacement, a major focus of research in San Diego and at the federal level. The team compared the genome of Volvox, a multicellular spherical algae, with that of the… [Read More]

Volvox carteri project in Algae Industry Magazine

One contribution that may inform biofuels research is reported in the July 9 issue of Science, where researchers led by the DOE Joint Genome Institute (JGI) and the Salk Institute presented the 138 million nucleotide genome of Volvox carteri, a multicellular alga that captures light energy through photosynthesis. The DOE is supporting research into the… [Read More]

Schizophyllum commune project on LabSpaces

“Schizophyllum commune is the second white rot fungus and third wood degrader we’ve sequenced. The DOE JGI sequenced the first white rot fungal genome — Phanerochaete chrysosporium — in 2004. Then last year we sequenced the first brown rot fungal genome – Postia placenta.” Postia was found to utilize a unique arsenal of small oxidizing… [Read More]

Volvox carteri project on Biology News Net

Prochnik points to both Volvox and Chlamydomonas as experimentally tractable model organisms where the information will be widely used, even by researchers who are not necessarily interested in Volvox biology. “Having the Volvox genome is a fantastic resource for directing further research towards our target areas of interest. With this pair of algal genomes in… [Read More]

Schizophyllum commune project on 7th Space

“The surprise we saw is how significantly larger is the variety of enzymes in S. commune that are involved in plant biomass degradation compared to P. chrysosporium,” Grigoriev said. “In fact, S. commune has among the most extensive enzymatic machinery for degrading cellulose, hemicellulose, and lignin of the fungi we examined.”   Read more in 7th… [Read More]

Volvox carteri project on Genetics Times

“The fundamental developmental biology interest in studying the Volvocine algae is that a single cell ancestor has evolved multicellularity and complicated cellular processes in a short evolutionary period,” explained DOE JGI bioinformaticist and co-first author Simon Prochnik. What the team found, he said, is “an astonishing lack of innovation” in the Volvox genome when compared… [Read More]