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Content Tagged "carbon cycle"

Toward a Better Understanding of Soil-Microbe Interactions

In the August 2011 issue of the Journal of Bacteriology, a team of researchers led by DOE JGI’s Patrick Chain at Los Alamos National Laboratory focused on a microbe that can help or harm as the case may be. Ochrobactrum anthropi thrives in a variety of habitats including polluted soil, plants and even higher mammals…. [Read More]

Dry rot (Serpula) genome on ScienceNewsline

As reported online July 14 in Science Express, an international team of scientists including DOE JGI researchers compared the genome of Serpula lacrymans, the second brown rot fungus to have its genome sequenced, against 10 other published fungal genomes. The DOE JGI sequenced seven of these genomes among them Postia placenta, the first brown rot… [Read More]

Dry rot (Serpula) project in Biofuels Journal

“For example, if you go back far enough in time to the period when trees were developing, there was no way to break lignocellulose down, which led to the coal seams we tap today.“When the fungi figured out how to break down lignocellulose, the coevolution of the fungi and trees kick-started the carbon cycle again.”… [Read More]

Dry rot (Serpula) genome project on Greenwire

Researchers have sequenced the genome for brown rot — also known as dry rot — in a step that could have applications for biofuels and better understanding of forest carbon cycling. Dry rot, a scourge of homeowners, is a fungus that decays wood by attacking its sugars — cellulose and hemicellulose — and working around… [Read More]

Dry rot (Serpula) genome project on WalesOnline

WELSH scientists are looking at harnessing the power of the virulent fungus which causes dry rot to help make biofuels of the future. Closer examination of the damaging fungus Serpula lacrymans as part of an international project led by Swansea University could also hold the key to protecting buildings from dry rot. Read more at… [Read More]

Serpula genome project on MyCor Fungal Web Genomics

The other good news of this Bastille Day: our paper on the Serpula lacrymans genome is reported online July 14 in Science Express. The Domestic Dry Rot (Serpula lacrymans, Basidiomycete, Coniophoraceae) comprises two subgroups, S. lacrymans varshastensis, found in montane conifer forests in the Himalayan foothills, and S. lacrymans var lacrymans, cause of building dry rot, which diverged in historic time [Kauserud et al. (2007) Mol. Ecol.16: 3350-3360].  Read… [Read More]

Wallaby Yields Insight Into Limiting Methane

Research published in the June 30 edition of Science Express features an analysis of the microbial content of the Tammar wallaby gut, which may inform strategies for diminishing greenhouse gas emissions from other ruminants. Selected as a sequencing target by the DOE JGI’s Community Sequencing Program (CSP) in 2007, scientists had became interested in these mini… [Read More]

Tagging coral proteins adapting to global climate change

Over the past two decades, scientists have linked the decrease in the pH levels of the global oceans and the corresponding slowdown in coral growth to the increasing levels of carbon dioxide trapped in the atmosphere and which in turn are being absorbed in the ocean. As coral reefs are the primary habitat for several… [Read More]

JGI Science @ the Lesher: “The Deal with Microbes” video

The May 9, 2011 event at the Lesher Center for the Arts in downtown Walnut Creek featured Jonathan Eisen and Rachel Mackelprang of DOE JGI, and Terry Hazen of Berkeley Lab. KTVU Health and Science Editor John Fowler served as panel moderator. (Note: There’s a short delay before the video starts at the 20-second mark.)… [Read More]

Fungal lessons for large-scale “green” chemical production

The chemical compound citric acid has been produced on a large-scale basis for decades with the help of the filamentous fungus Aspergillus niger. The fungus also has enzymes that can be used to help break down plant cell walls for biofuel production, and it plays a key role in the carbon cycle. Aspergillus niger (Sue… [Read More]