Archive

  • Visit JGI.DOE.GOV
Our Projects
Home › CSP Plans › Why Sequence Hoatzin crop microbiome?

Approved Proposals FY09

Why Sequence Hoatzin crop microbiome?

The hoatzin is a chicken-sized relative of the cuckoo bird that can’t fly very well and smells like cow manure. It can express itself through hisses, meows or screams and the chicks are born with functional claws at its fledgling wingtips so they can climb to avoid predators. Found in the South American lowlands, specifically in Venezuela, Peru, Bolivia and the Amazonian Brazil, the hoatzin only eats leaves, a light diet compared to other birds that go for higher-energy food sources such as fruits and seeds.

Photo: Maria G. Dominguez-Bello

Photo: Maria G. Dominguez-Bello

The hoatzin’s distinctive smell turns out to be linked to its inability to fly. The bird has an enlarged crop and upper esophagus, which crowds out space on the sternum (wishbone) for flight muscles. The crop or foregut is similar to a cow’s rumen and contains microbial communities that break down the leafy biomass in its meals. Because of this foregut fermentation, the smelly bird that can be detected before it is even sighted. Taking advantage of the similarity between the hoatzin foregut and the cow rumen, researchers want to sequence the microbial communities in the bird’s crop using methods previously established for studying termite hindguts. They hope to identify novel enzymes that can break down plant cell walls for biofuel applications and gain insight into how these microbial communities are shaped by their hosts.

Principal Investigators: Maria G. Dominguez-Bello

Program: CSP 2009

Share this:

  • Click to share on Facebook (Opens in new window)
  • Click to share on LinkedIn (Opens in new window)
  • Click to share on Pinterest (Opens in new window)
  • Click to share on Twitter (Opens in new window)
  • Click to print (Opens in new window)

More from the JGI archives:

  • Software Tools
  • Science Highlights
  • News Releases
  • Blog
  • User Proposals
  • 2018-24 Strategic Plan
  • Progress Reports
  • Historical Primers
  • Legacy Projects
  • Past Events
  • JGI.DOE.GOV
  • Disclaimer
  • Accessibility / Section 508
Lawrence Berkeley National Lab Biosciences Area
A project of the US Department of Energy, Office of Science

JGI is a DOE Office of Science User Facility managed by Lawrence Berkeley National Laboratory

© 1997-2025 The Regents of the University of California